Semantic categories underlying the meaning of ‘place’

This paper analyses the semantics of natural language expressions that are associated with the intuitive notion of ‘place’. We note that the nature of such terms is highly contested, and suggest that this arises from two main considerations: 1) there are a number of logically distinct categories of place expression, which are not always clearly distinguished in discourse about ‘place’; 2) the many non-substantive place count nouns (such as ‘place’, ‘region’, ‘area’, etc.) employed in natural language are highly ambiguous. With respect to consideration 1), we propose that place-related expressions should be classified into the following distinct logical types: a) ‘place-like’ count nouns (further subdivided into abstract, spatial and substantive varieties), b) proper names of ‘place-like’ objects, c) locative property phrases, and d) definite descriptions of ‘place-like’ objects. We outline possible formal representations for each of these. To address consideration 2), we examine meanings, connotations and ambiguities of the English vocabulary of abstract and generic place count nouns, and identify underlying elements of meaning, which explain both similarities and differences in the sense and usage of the various terms

Applying spatial reasoning to topographical data with a grounded geographical ontology

Grounding an ontology upon geographical data has been pro- posed as a method of handling the vagueness in the domain more effectively. In order to do this, we require methods of reasoning about the spatial relations between the regions within the data. This stage can be computationally expensive, as we require information on the location of points in relation to each other. This paper illustrates how using knowledge about regions allows us to reduce the computation required in an efficient and easy to understand manner. Further, we show how this system can be implemented in co-ordination with segmented data to reason abou

Quantized spin waves in the metallic state of magnetoresistive manganites

High resolution spin waves measurements have been carried out in ferromagnetic (F) La(1-x)(Sr,Ca)xMnO3 with x(Sr)=0.15, 0.175, 0.2, 0.3 and x(Ca)=0.3. In all q-directions, close to the zone boundary, the spin wave spectra consist of several energy levels, with the same values in the metallic and the x\approx 1/8 ranges. Mainly the intensity varies, jumping from the lower energy levels determined in the x\approx 1/8 range to the higher energy ones observed in the metallic state. On the basis of a quantitative agreement found for x(Sr)=0.15 in a model of ordered 2D clusters, the spin wave anomalies of the metallic state can be interpreted in terms of quantized spin waves within the same 2D clusters, embedded in a 3D matrix.Comment: 4 pages, 5 figure

Mutations in RSPH1 cause primary ciliary dyskinesia with a unique clinical and ciliary phenotype

Rationale: Primary ciliary dyskinesia (PCD) is a genetically heterogeneous recessive disorder of motile cilia, but the genetic cause is not defined for all patients with PCD. Objectives: To identify disease-causingmutations in novel genes, we performed exome sequencing, follow-up characterization, mutation scanning, and genotype-phenotype studies in patients with PCD. Methods: Whole-exome sequencing was performed using NimbleGen capture and Illumina HiSeq sequencing. Sanger-based sequencing was used for mutation scanning, validation, and segregation analysis. Measurements and Main Results: We performed exome sequencing on an affected sib-pair with normal ultrastructure in more than 85% of cilia. A homozygous splice-site mutation was detected in RSPH1 in both siblings; parents were carriers. Screening RSPH1 in 413 unrelated probands, including 325 with PCD and 88 with idiopathic bronchiectasis, revealed biallelic loss-of-function mutations in nine additional probands. Five affected siblings of probands in RSPH1 families harbored the familial mutations. The 16 individuals with RSPH1 mutations had some features of PCD; however, nasal nitric oxide levels were higher than in patients with PCD with other gene mutations (98.3 vs. 20.7 nl/min; P , 0.0003). Additionally, individuals with RSPH1 mutations had a lower prevalence (8 of 16) of neonatal respiratory distress, and later onset of daily wet cough than typical for PCD, and better lung function (FEV1), compared with 75 age- and sex-matched PCD cases (73.0 vs. 61.8, FEV1 % predicted; P = 0.043). Cilia from individuals with RSPH1 mutations had normal beat frequency (6.16Hz at 258C), but an abnormal, circular beat pattern. Conclusions: The milder clinical disease and higher nasal nitric oxide in individuals with biallelic mutations in RSPH1 provides evidence of a unique genotype-phenotype relationship in PCD, and suggests that mutations in RSPH1 may be associated with residual ciliary function

Cognitive Invariants of Geographic Event Conceptualization: What Matters and What Refines?

Behavioral experiments addressing the conceptualization of geographic events are few and far between. Our research seeks to address this deficiency by developing an experimental framework on the conceptualization of movement patterns. In this paper, we report on a critical experiment that is designed to shed light on the question of cognitively salient invariants in such conceptualization. Invariants have been identified as being critical to human information processing, particularly for the processing of dynamic information. In our experiment, we systematically address cognitive invariants of one class of geographic events: single entity movement patterns. To this end, we designed 72 animated icons that depict the movement patterns of hurricanes around two invariants: size difference and topological equivalence class movement patterns endpoints. While the endpoint hypothesis, put forth by Regier (2007), claims a particular focus of human cognition to ending relations of events, other research suggests that simplicity principles guide categorization and, additionally, that static information is easier to process than dynamic information. Our experiments show a clear picture: Size matters. Nonetheless, we also find categorization behaviors consistent with experiments in both the spatial and temporal domain, namely that topology refines these behaviors and that topological equivalence classes are categorized consistently. These results are critical steppingstones in validating spatial formalism from a cognitive perspective and cognitively grounding work on ontologies

Whole-genome sequencing reveals host factors underlying critical COVID-19

Critical COVID-19 is caused by immune-mediated inflammatory lung injury. Host genetic variation influences the development of illness requiring critical care1 or hospitalization2,3,4 after infection with SARS-CoV-2. The GenOMICC (Genetics of Mortality in Critical Care) study enables the comparison of genomes from individuals who are critically ill with those of population controls to find underlying disease mechanisms. Here we use whole-genome sequencing in 7,491 critically ill individuals compared with 48,400 controls to discover and replicate 23 independent variants that significantly predispose to critical COVID-19. We identify 16 new independent associations, including variants within genes that are involved in interferon signalling (IL10RB and PLSCR1), leucocyte differentiation (BCL11A) and blood-type antigen secretor status (FUT2). Using transcriptome-wide association and colocalization to infer the effect of gene expression on disease severity, we find evidence that implicates multiple genes—including reduced expression of a membrane flippase (ATP11A), and increased expression of a mucin (MUC1)—in critical disease. Mendelian randomization provides evidence in support of causal roles for myeloid cell adhesion molecules (SELE, ICAM5 and CD209) and the coagulation factor F8, all of which are potentially druggable targets. Our results are broadly consistent with a multi-component model of COVID-19 pathophysiology, in which at least two distinct mechanisms can predispose to life-threatening disease: failure to control viral replication; or an enhanced tendency towards pulmonary inflammation and intravascular coagulation. We show that comparison between cases of critical illness and population controls is highly efficient for the detection of therapeutically relevant mechanisms of disease

Analysing the familiar Reasoning about space and time in the everyday world

SIGLEAvailable from British Library Document Supply Centre- DSC:D97127 / BLDSC - British Library Document Supply CentreGBUnited Kingdo